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IGVFFI3550CIIB

released
validated
File Set
IGVFDS8528TQHC(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 261
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2104_R2
bradley-bernstein:SS-LS_261_R2
buenrostro-bernstein:SS-LS_2104_R2
buenrostro-bernstein:SS-LS_261_R2
md5sum
5404b91f4961e72c119855425ae2cc56
Content MD5sum
5746097970f79efc2976ad7947409bd5
File Size
768 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-186_L2_SS-PKR-131_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
261
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
14890770

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.3 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
887 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9611UAWB, IGVFFI3550CIIB
Jason Buenrostro, Broad
1.2 KB
validated