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INDEXED
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SequenceFile
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IGVFFI3545HELW
IGVFFI3545HELW
released
validated
Json view
File Set
IGVFDS8729LTAJ
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day0_L8_R1
md5sum
8ca94e367828c1e836d62af66899de5c
Content MD5sum
6cef5b53d43c94e453e90660b36a0915
File Size
3.2 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C39D0-Pos1-C06_S27_L008_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
8
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.78
Read Count
44633959
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8158AYJT
InVitroSystem
fibroblast
fibroblast cell line, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA