Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI3540DIRZ
IGVFFI3540DIRZ
released
validated
Json view
File Set
IGVFDS5081XXKG
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1060
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_1060_R1
md5sum
4f5f8a13ca04d493331f97a14d5e7ab2
Content MD5sum
a8034d82e5b053d98ce17883e6bfbd3e
File Size
867 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-947_L4_SS-PKR-179_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1060
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
16011261
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6528GBQO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 179)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9340BMBC
yaml
seqspec
seqspec of IGVFFI3540DIRZ, IGVFFI8321VAWY, IGVFFI2274HYMB
Jason Buenrostro, Broad
1.3 KB
validated