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INDEXED
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SequenceFile
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IGVFFI3539IOGW
IGVFFI3539IOGW
released
validated
Json view
File Set
IGVFDS7571FXYP
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 3809
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3809_R2
md5sum
1623cb2a040e2484acbee211c13568e7
Content MD5sum
85e77b36e1fbc7c6302144cfa7ea76dc
File Size
1.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1538_L1_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3809
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
18615814
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9238INBM
yaml
seqspec
seqspec of IGVFFI2642WOZN, IGVFFI3539IOGW
Jason Buenrostro, Broad
1.3 KB
validated