IGVFFI3536GNWI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6353IHVX(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G5_P062_L007_R2

md5sum

07f5bed446aee8e346c9755d83b34d03

Content MD5sum

4c55a43c93d2db23d80087b8150f47a8

File Size

1.7 GB

Submitted File Name

Multiome_RNA_RP014_G5_L009_P062_S33_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

40846458

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5142KRLD

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples