Home

IGVFFI3532IJYB

released
validated
File Set
IGVFDS3642NEVV(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1616
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1616_R1
buenrostro-bernstein:SS-LS_1616_R1
md5sum
b1c54320327ea0deb4294cff53459b4c
Content MD5sum
a8648bf164c8fa7b9c300f27ddb968d1
File Size
995 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1113_L3_SS-PKR-5_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1616
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
48080411

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Homo sapiens (male, 26 years) bone marrow cell (cellular sub pool: SS-PKR 5)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated