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INDEXED
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SequenceFile
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IGVFFI3521DARM
IGVFFI3521DARM
released
validated
Json view
File Set
IGVFDS7938OXSK
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 5381
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5381_R2
md5sum
501d911638923cf8fbd9fff5c74c84a3
Content MD5sum
83ade7b4ccb8d1fba5bef7a99d12c1c7
File Size
6.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1590_L5_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5381
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
88119512
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2897TNFT
yaml
seqspec
seqspec of IGVFFI7735CDGU, IGVFFI3521DARM
Jason Buenrostro, Broad
1.3 KB
validated