IGVFFI3513VXZQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4413FCPJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G3_P062_L007_I1

md5sum

ef5e8060cedf80764f2c01f0faf29685

Content MD5sum

3fcc6b1cd1f1b689eacd7b0820df00e9

File Size

293 MB

Submitted File Name

Multiome_RNA_RP013_G3_L003_P062_S23_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

51409053

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2861OAVH

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples