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INDEXED
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SequenceFile
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IGVFFI3502EOYB
IGVFFI3502EOYB
released
validated
Json view
File Set
IGVFDS8225URBF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7335
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7335_R1
md5sum
068e65000fca2f04e19a2815ac24b574
Content MD5sum
cb22c3c6233e64b3050b599e1fd21562
File Size
6.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1912_L6_SS-PKR-435_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7335
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
166069200
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4121TWUU
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8993BLAC
yaml
seqspec
seqspec of IGVFFI3502EOYB, IGVFFI8918FMWS
Jason Buenrostro, Broad
1.3 KB
validated