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IGVFFI3497IEEM

released
validated
File Set
IGVFDS2538CIPJ(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
md5sum
bf57823f6b067b31e46888d18c6d6569
Content MD5sum
fe4fd11d9cae66dcab1397d7a5ee51f8
File Size
13 GB
Submitted File Name
igvf_005/nova2/igvf_005_B11_D_nova_N2_L001_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Flowcell ID
HVYNYDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
183560575

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.7 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI3497IEEM, IGVFFI4471DENP
Ali Mortazavi, UCI
1.4 KB
validated