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IGVFFI3491CKAI
IGVFFI3491CKAI
released
validated
Json view
File Set
IGVFDS0193IKYP
(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
f83fe37e564ccbfb23a24b38f4d3359f
Content MD5sum
0601f5cf4e3df5305e8d893f285692ca
File Size
13 GB
Submitted File Name
igvf_004/nova1/igvf_004_B11_D_nova_N1_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
HTH33DSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
183626690
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6158ZDKG
MultiplexedSample
heart
,
liver
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3592AFMC
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1515ZBOI
yaml
seqspec
seqspec of IGVFFI3491CKAI, IGVFFI4662QYVY
Ali Mortazavi, UCI
1.4 KB
validated