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INDEXED
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SequenceFile
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IGVFFI3484UBVB
IGVFFI3484UBVB
released
validated
Json view
File Set
IGVFDS4736GQFE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8351
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8351_R1
md5sum
f4dd5e3e9efd71b3baaa3b99160e941b
Content MD5sum
455841953cc090b6387a87eb16a908c6
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2237_L8_SS-PKR-584_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8351
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
34901064
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6228EUYU
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8926OWOZ
yaml
seqspec
seqspec of IGVFFI3484UBVB, IGVFFI7188XXIH
Jason Buenrostro, Broad
1.3 KB
validated