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INDEXED
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SequenceFile
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IGVFFI3475SVVG
IGVFFI3475SVVG
released
validated
Json view
File Set
IGVFDS1443GIQX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 4291
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4291_R1
md5sum
a91cfcbb7550bbf560887620fd265da0
Content MD5sum
eb1e7dc70486c9da8f645701dd368e33
File Size
5.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-501_L4_SS-PKR-208_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4291
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
85407044
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8598BUOK
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0592JIJT
yaml
seqspec
seqspec of IGVFFI3475SVVG, IGVFFI1768PLGI, IGVFFI7967QQNW
Jason Buenrostro, Broad
1.4 KB
validated