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INDEXED
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SequenceFile
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IGVFFI3472YZEC
IGVFFI3472YZEC
released
validated
Json view
File Set
IGVFDS4869FXYY
(untransfected prime editing Variant-EFFECTS)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:230423pPPIFEnformer-Jurkat-Amp_PPIF_promoter-Jurkat-PE2_Exp2_NegControl-PCRrep2_R1
md5sum
9a401eca9143a595f6dbd99a0cbe0f72
Content MD5sum
1a35e8fd75ab18a9f927cc70a0b4bf02
File Size
6.0 MB
Submitted File Name
230423pPPIFEnformerJurkat-Jurkat-PE-NA-Amp-pPPIF-BioRep1-FFRep1_BinNeg-PCRrep2_S402_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jesse Engreitz, Stanford
(
HG011972
—
Jesse Engreitz
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
R1
Index
AGGTTATC:TTGT
Average Read Length
150
Read Count
225400
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3422KXGR
InVitroSystem
Jurkat
Homo sapiens (male) Jurkat cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)