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INDEXED
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SequenceFile
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IGVFFI3463YQPR
IGVFFI3463YQPR
released
validated
Json view
File Set
IGVFDS1813UKUP
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 9
File Format
fastq
Content Type
reads
md5sum
7442549f7a492fc6bf8c04da6eb35181
Content MD5sum
82c366a9db96b71c675a98c647ea9230
File Size
6.3 GB
Submitted File Name
igvf_009/nova2/igvf_009_B02_D_nova_N2_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
9
Flowcell ID
H5VH3DSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
177628982
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9611AGDB
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7100DGNS
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8817JAZX
yaml
seqspec
seqspec of IGVFFI3463YQPR, IGVFFI1571WDUD
Ali Mortazavi, UCI
1.4 KB
validated