IGVFFI3462FVQI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2903AZNH(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G7_P052_L003_R1

md5sum

e30308facb9d9c2a58650d01792f5854

Content MD5sum

081839a45c1478846948945d69a82311

File Size

728 MB

Submitted File Name

Multiome_RNA_RP001_G7_L007_P052_S7_L003_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

36160514

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8255WJLC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples