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IGVFFI3461TRFF

released
validated
File Set
IGVFDS3559JQYJ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2600
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2600_R1
buenrostro-bernstein:SS-LS_2600_R1
md5sum
0dcefa6f14b8f34747a1a17f27403801
Content MD5sum
258527fa0e028a9d4dec89abd38e0b2b
File Size
382 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-76_L4_SS-PKR-7_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2600
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
19279038

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad