IGVFFI3455HMZC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7612PDSF(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X055_G7_P074_L003_R1

md5sum

74bdad4b070a2dfa6c13de9c87f0b6bd

Content MD5sum

8f980f52c4ae5403dbe7008a5c161696

File Size

17 GB

Submitted File Name

Multiome_RNA_X055_G7_L007_P074_S27_L003_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

196862039

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5427KDIM

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 74 years) cerebellar cortex tissue; ... and 8 more samples