IGVFFI3447DSAC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7806UOQI(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G2_P060_L007_R2

md5sum

1b2a18d277af403940155e9e7ce75963

Content MD5sum

012dbdb2e038eb9cf9be8c258cdac09f

File Size

2.9 GB

Submitted File Name

Multiome_RNA_RP011_G2_L007_P060_S31_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

69402908

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9347ZBKI

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples