IGVFFI3445XVMG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2892UJBV(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X048_G2_P050_L002_R2

md5sum

bdb552dc80ce92c1f1647545bffc407d

Content MD5sum

5f35f3a021007f512aca0dca9aadb16f

File Size

17 GB

Submitted File Name

Multiome_RNA_X048_G2_L002_P050_S18_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

298121183

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4666GHWA

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples