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INDEXED
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SequenceFile
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IGVFFI3429LZHM
IGVFFI3429LZHM
released
validated
Json view
File Set
IGVFDS2186PCOF
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C39_day12_L4_R1
md5sum
2f33e7e2f4e5b4fa3979f2c14d0eeb1b
Content MD5sum
7bf593515bfedc412cc9dce4503474ab
File Size
7.8 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C39D12-Pos1-C08_S32_L004_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
149.03
Read Count
100993943
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3009NMJU
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA