IGVFFI3418XPEL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4024PLUG(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G2_P052_L004_I1

md5sum

d1fcec0cbffeb3c28a50d3bd1ffd04a6

Content MD5sum

84c3f05cd38283fc74faf834ea60763e

File Size

289 MB

Submitted File Name

Multiome_RNA_RP001_G2_L002_P052_S2_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

43570024

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7915KUKE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples