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INDEXED
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SequenceFile
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IGVFFI3417NQWN
IGVFFI3417NQWN
released
validated
Json view
File Set
IGVFDS4752BWME
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 5383
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5383_R1
md5sum
5976d4a6e28ac7d85886e80010b8554f
Content MD5sum
0a0254ecef1c382b0a42e841965006d6
File Size
7.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1592_L5_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5383
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
166248317
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7669KDDW
yaml
seqspec
seqspec of IGVFFI3417NQWN, IGVFFI5346KGGA
Jason Buenrostro, Broad
1.3 KB
validated