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INDEXED
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SequenceFile
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IGVFFI3415SOSI
IGVFFI3415SOSI
released
validated
Json view
File Set
IGVFDS3755JEOE
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C37_day0_L2_R1
md5sum
f79ec5e897f3a13c4a67aa56999cf5e7
Content MD5sum
363edde350e1aee1dda2448ce4c06421
File Size
2.6 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl48/20231016-3C37D0-Pos1-B05_S16_L002_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
147.86
Read Count
37813568
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9498BCKY
InVitroSystem
fibroblast
fibroblast cell line, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA