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INDEXED
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SequenceFile
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IGVFFI3401OEDP
IGVFFI3401OEDP
released
validated
Json view
File Set
IGVFDS3548TJJM
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8702
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8702_R1
md5sum
961693d3e1072064126a685023c0ebe8
Content MD5sum
afb816b618ea595d536c0695ab394c1a
File Size
662 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2340_L3_SS-PKR-206_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8702
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
14643442
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6043MNJX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0805WOGG
yaml
seqspec
seqspec of IGVFFI3401OEDP, IGVFFI1129XLXW, IGVFFI7487ZJHS
Jason Buenrostro, Broad
1.3 KB
validated