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IGVFFI3398FCKN
IGVFFI3398FCKN
released
validated
Json view
File Set
IGVFDS0059HMSM
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2551
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2551_R2
buenrostro-bernstein:SS-LS_2551_R2
md5sum
5482d216dc5d21ee7561c06fea8b603d
Content MD5sum
1503f8fd226ef222b9e5c30f2dcfd1db
File Size
704 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-27_L4_SS-PKR-3_SS-V1-2nd-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2551
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
15627366
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7081AOVO
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 3), female, Homo sapiens (19 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad