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IGVFFI3389PHQA
IGVFFI3389PHQA
released
validated
Json view
File Set
IGVFDS3189UXGY
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2381
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2381_R2
buenrostro-bernstein:SS-LS_2381_R2
md5sum
838fc7bb03e7aca3b60eb88b3c85b3b1
Content MD5sum
e67e3cd227edf737b4ae86a9b292e89b
File Size
992 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-49_L2_SS-PKR-5_SS-V1-1st-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2381
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
21861999
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7251TZFC
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (26 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad