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INDEXED
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SequenceFile
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IGVFFI3371KNQO
IGVFFI3371KNQO
released
validated
Json view
File Set
IGVFDS6783BLZB
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8280
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8280_R1
md5sum
beb1cad50066ccd1fa9d2ad222e7fc5f
Content MD5sum
0935b9a2a323ada422283ad03907a9a2
File Size
3.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2158_L2_SS-PKR-533_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8280
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
85149642
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4295RKOR
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3692GUHO
yaml
seqspec
seqspec of IGVFFI3371KNQO, IGVFFI7717KGHD
Jason Buenrostro, Broad
1.2 KB
validated