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INDEXED
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SequenceFile
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IGVFFI3368XUML
IGVFFI3368XUML
released
validated
Json view
File Set
IGVFDS1554OVKW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8391
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8391_R1
md5sum
f2621e2576b4f9af9d6e548b4c49f983
Content MD5sum
476c3e826bc9c9a760a9c60df9db8a38
File Size
5.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2251_L6_SS-PKR-603_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8391
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
130045977
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9407UDAJ
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 603)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6044TRRB
yaml
seqspec
seqspec of IGVFFI3368XUML, IGVFFI6943YYXC
Jason Buenrostro, Broad
1.3 KB
validated