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INDEXED
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SequenceFile
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IGVFFI3364MPWN
IGVFFI3364MPWN
released
validated
Json view
File Set
IGVFDS1592MBRQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 5382
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5382_R1
md5sum
bbd4a222eb4e905386c2cb97416b780c
Content MD5sum
3420c1851b7419118dbf5a3da591e14f
File Size
7.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1591_L5_SS-PKR-435_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5382
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
163002523
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4121TWUU
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6864KBCA
yaml
seqspec
seqspec of IGVFFI3364MPWN, IGVFFI7237DHQB
Jason Buenrostro, Broad
1.3 KB
validated