Home

IGVFFI3363SETS

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9120JYMC(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 221
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX15-SC3_snATAC_S3_R3
md5sum
a54e62dfc770c589a4f829c66a45af82
Content MD5sum
ade6dc57bb87f9ee1d358ff574e8eedd
File Size
11 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX15-SC3/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX15-SC3-ATAC_S6_L004_R3_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
221
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
230337619

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 34.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 23.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF