{
"@context": "/terms/",
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"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI3349WKOP",
"aliases": [
"jesse-engreitz:220829_8merInsertion-Jurkat_Stimulation-Amp_PPIF_promoter-BioRep2-FFrep1-BinD-PCRrep1_I1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI3349WKOP](/sequence-files/IGVFFI3349WKOP/) has in progress subobject auxiliary set [IGVFDS0253FYBC](/auxiliary-sets/IGVFDS0253FYBC/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI3349WKOP/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "13e45eb8a4084182b24d4b93ef993ce1",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T19:50:10.916878+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS0253FYBC/",
"file_size": 3094968,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI3349WKOP/@@download/IGVFFI3349WKOP.fastq.gz",
"illumina_read_type": "I1",
"index": "CCTTCGCA:GTCA",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 8,
"md5sum": "a1fe677f3e62c0fa83d2c3a21afd328e",
"mean_read_length": 8,
"minimum_read_length": 8,
"read_count": 391884,
"release_timestamp": "2023-12-21T00:07:24.451046+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/b2e812d3-8fd0-42fb-b021-caf59f2a94c1/IGVFFI3349WKOP.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF2_S15-BioRep2-FFRep1-BinD-PCRrep1_S130_I1_001.fastq.gz",
"summary": "I1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "b2e812d3-8fd0-42fb-b021-caf59f2a94c1"
}