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INDEXED
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SequenceFile
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IGVFFI3348LFGT
IGVFFI3348LFGT
released
validated
Json view
File Set
IGVFDS7929XOMS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4306
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4306_R1
md5sum
463f317805c421eb8faa410baea054ea
Content MD5sum
fd37c850b85ace77d7abdda4600850ac
File Size
5.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-581_L3_SS-PKR-199_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4306
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
82558515
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4768GZVP
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1388CDMX
yaml
seqspec
seqspec of IGVFFI3348LFGT, IGVFFI6129QTDL, IGVFFI6832CFMS
Jason Buenrostro, Broad
1.3 KB
validated