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INDEXED
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SequenceFile
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IGVFFI3343JDAX
IGVFFI3343JDAX
released
validated
Json view
File Set
IGVFDS0880SMRE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8720
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8720_R1
md5sum
05d06a7a945a848ed2c9b4eabd38bd81
Content MD5sum
3fd418ae84db3a700ac377114afb80d6
File Size
393 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2262_L4_SS-PKR-167_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8720
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
8622292
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2260RCEH
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 167)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9286AVXV
yaml
seqspec
seqspec of IGVFFI3343JDAX, IGVFFI5734WRHL, IGVFFI1938YMLS
Jason Buenrostro, Broad
1.3 KB
validated