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INDEXED
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SequenceFile
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IGVFFI3327WMXG
IGVFFI3327WMXG
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6313MUQP
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 477
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX6-SC1_snRNA_S0_R1
md5sum
b7dd05a16795f179a31241b329c18f7b
Content MD5sum
3e2792c90b6d0be3a6e7680c4a499b01
File Size
5.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX6-SC1/AH2YMLDSX3_ICJY03/XHLT1-POOL-XX6-SC1-GEX_S5_L001_R1_001.fastq.gz
Checkfiles Version
v17
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
477
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
148595339
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2228XCXF
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 18.0 years) peripheral blood mononuclear cell; ... and 17 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF