Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI3324ZPLX
IGVFFI3324ZPLX
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4099RLTS
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I1 reads from sequencing run 223
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX15-SC3_snRNA_S1_I1
md5sum
6f6929baee1bc2e852716db0f54a37ae
Content MD5sum
410eed011fff6ab339d5579cbfa81005
File Size
1.8 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX15-SC3/BH73JJDSX3_ICJY07/XHLT1-POOL-XX15-SC3-GEX_S6_L002_I1_001.fastq.gz
Checkfiles Version
v17
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
223
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
10
Read Count
302239791
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5737IONT
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 34.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 23.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF