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IGVFFI3316IGAO

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9636SNGC(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 73
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX11-SC1_snATAC_S0_R1
md5sum
bac1b992e2cfcbc100ed41b4ee1ff70b
Content MD5sum
001c3e996d7aa15ae1de3827818e6d12
File Size
6.9 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX11-SC1/AHFFGGDSX2/XHLT1-POOL-XX11-SC1-ATAC_S7_L001_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
73
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
225319159

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 25.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 62.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF