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IGVFFI3311SGCE
IGVFFI3311SGCE
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3495FUIW
(CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
gary-hon:LW289_1_I1
md5sum
dad2850329797b60a821e0c20b82575f
Content MD5sum
445a7a50f2a0989dcba14649a48d7f52
File Size
875 MB
Submitted File Name
/project/GCRB/Hon_lab/shared/data/sequencing_data/2023/2023-11-03-McDermott-NextSeq.10X.run1/2023-11-03/outs/fastq_path/AAC7TGLHV//LW289_S4_L001_I1_001.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC7TGLHV
Lane
1
Illumina Read Type
I1
Average Read Length
10
Read Count
133481342
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1597KVRS
InVitroSystem
GM25256 (WTC-11)
GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW289), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library
Attribution
Award
HG011996
Principal Investigator(s)
Bruce Posner
,
Gary Hon
,
William Kraus
,
Nikhil Munshi
,
Maria Chahrour
Contact P.I.
Gary Hon
Lab
Gary Hon, UT