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INDEXED
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SequenceFile
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IGVFFI3301GYAT
IGVFFI3301GYAT
released
validated
Json view
File Set
IGVFDS1011YMSG
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C29_day5_L4_R1
md5sum
f4a4ef4b12315ffc89bcd019fd721f10
Content MD5sum
6a25f99f6b5bfd83f878ce6a41cf7f5c
File Size
3.3 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl46/20230918-3C29D5-Pos1-B01_S9_L004_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
149.41
Read Count
49792391
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2376KHRW
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 5 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA