Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI3291DCPV
IGVFFI3291DCPV
released
validated
Json view
File Set
IGVFDS0524UJOI
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8422
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8422_R1
md5sum
6c9f2c3074b5cfc3ab5ca82c2c47af1a
Content MD5sum
eab8d229077be54894b77fd6f538bbd9
File Size
5.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2242_L3_SS-PKR-603_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8422
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
122951705
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1833ODAY
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 603)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4977ATRU
yaml
seqspec
seqspec of IGVFFI3291DCPV, IGVFFI2326PFJQ
Jason Buenrostro, Broad
1.3 KB
validated