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IGVFFI3287CKBE

released
validated
File Set
IGVFDS1267CSNQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2348
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2348_R1
buenrostro-bernstein:SS-LS_2348_R1
md5sum
38564eba675a55fcab05c2e5bec51b02
Content MD5sum
3d87683c9a700ac41d673f0954db8a83
File Size
495 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-16_L2_SS-PKR-2_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2348
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
25195745

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad