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INDEXED
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SequenceFile
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IGVFFI3284HXKW
IGVFFI3284HXKW
released
validated
Json view
File Set
IGVFDS8443TPUF
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 854
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_854_R1
md5sum
c66490614431bd8064694d86a1f06ff9
Content MD5sum
2da82c905c599b15bcfff7f31c0ddd81
File Size
710 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-909_L5_SS-PKR-181_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
854
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
12215962
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6601RSAH
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 181)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6670CMNW
yaml
seqspec
seqspec of IGVFFI3284HXKW, IGVFFI5960GAQC, IGVFFI7385MCKI
Jason Buenrostro, Broad
1.4 KB
validated