IGVFFI3279BRAW

released
validated
{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI3279BRAW/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI3279BRAW",
    "aliases": [
        "jesse-engreitz:auxiliary_file_CRUDO_CCND1_Auxin0hrs-FF2-BinC-PCR4-Rep1_S279"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "d1552c64aabd7bc5603def79202cb725",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2024-06-01T01:38:12.527386+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS8736DPTS/",
    "file_size": 21998916,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI3279BRAW/@@download/IGVFFI3279BRAW.fastq.gz",
    "index": "ATTATCAA:GCCA",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 21,
    "md5sum": "102a56f4f9d3638e02063c8af9350cc2",
    "mean_read_length": 21,
    "minimum_read_length": 21,
    "read_count": 1000123,
    "release_timestamp": "2024-07-10T20:08:44.390990+00:00",
    "s3_uri": "s3://igvf-files/2024/06/01/af68bf52-73c6-4b69-8dc9-04397702003b/IGVFFI3279BRAW.fastq.gz",
    "schema_version": "14",
    "seqspecs": [
        "/configuration-files/IGVFFI8143HFAY/"
    ],
    "sequencing_platform": "/platform-terms/EFO_0008565/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/100f06c6-83a7-4b4d-9dfd-053a1829773b/",
        "title": "Benjamin Doughty"
    },
    "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/220308B014_CCND1_SSFA2_FAM3C/fastq_trim/CCND1-Auxin0hrs-FF2-BinC-PCR4-Rep1_S279_R1_001.fastq.gz",
    "summary": "reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "af68bf52-73c6-4b69-8dc9-04397702003b"
}