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INDEXED
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SequenceFile
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IGVFFI3272INBB
IGVFFI3272INBB
released
validated
Json view
File Set
IGVFDS6390BVFD
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4315
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4315_R1
md5sum
3ae183777e43d9c7a55893856f9d88f1
Content MD5sum
aa64c9363b77a131f33954c901749945
File Size
12 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-570_L3_SS-PKR-168_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4315
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
180403767
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9995OMDD
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 168)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5429PNHI
yaml
seqspec
seqspec of IGVFFI3272INBB, IGVFFI1053EWFT, IGVFFI9958QPWR
Jason Buenrostro, Broad
1.3 KB
validated