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INDEXED
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SequenceFile
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IGVFFI3255EWVK
IGVFFI3255EWVK
released
validated
Json view
File Set
IGVFDS0193IKYP
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
md5sum
3ee71f65efd4ca7a55d45608ca37d9cc
Content MD5sum
0e4ce7859aed3e2b999b63f60a51f187
File Size
6.2 GB
Submitted File Name
igvf_004/nova1/igvf_004_B11_D_nova_N1_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Flowcell ID
HTH33DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
176618805
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6158ZDKG
MultiplexedSample
heart
,
liver
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3592AFMC
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0794MNNB
yaml
seqspec
seqspec of IGVFFI3255EWVK, IGVFFI7876LLYI
Ali Mortazavi, UCI
1.4 KB
validated