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IGVFFI3229MBWW

released
validated
File Set
IGVFDS1201SHMG(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp5_atac_10x4_NGS2_r2
md5sum
35b9c2422619cda7b969c5819b4ddcd5
Content MD5sum
d287789f681631d5878123f8267ca00e
File Size
4.4 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230522_IGVF5_McGinnis/ATAC/FASTQ/ATAC_4_S10_L006_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
222YV7LT3
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
24
Read Count
267191376

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 6 days; Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 6 days; ... and 6 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
6.1 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1901KKVA, IGVFFI3229MBWW, IGVFFI5594EEAT, IGVFFI1990SBCJ
Ansuman Satpathy, Stanford
1.4 KB
validated