IGVFFI3223NTAB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5365DMUS(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP026_G7_P076_L006_R2

md5sum

23396b0f69af59c432ced5787c81d0bf

Content MD5sum

2cb4e35c57fe63a73790713351b58730

File Size

12 GB

Submitted File Name

Multiome_RNA_RP026_G7_L007_P076_S47_L006_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

171797125

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6899HSQU

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 6 more samples