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INDEXED
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SequenceFile
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IGVFFI3204NMTN
IGVFFI3204NMTN
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 5373
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5373_R2
md5sum
6a5b248bea800e802d06ee14e517684a
Content MD5sum
d01769fcce73968d89b7423ef8a08110
File Size
8.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1578_L3_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5373
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
138288038
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2800VZKP
yaml
seqspec
seqspec of IGVFFI0312VUCN, IGVFFI3204NMTN
Jason Buenrostro, Broad
1.2 KB
validated