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INDEXED
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SequenceFile
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IGVFFI3199VWVM
IGVFFI3199VWVM
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0424WDCP
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I1 reads from sequencing run 81
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX11-SC1_snRNA_S2_I1
md5sum
f592e46a4afa852793018d035a710910
Content MD5sum
78eefcdd4a03955c4e4000beceacee4d
File Size
1.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX11-SC1/BHM2MWDSX2/XHLT1-POOL-XX11-SC1-GEX_S7_L003_I1_001.fastq.gz
Checkfiles Version
v17
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
81
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
10
Read Count
170529425
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8525WUDY
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 25.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 62.0 years) peripheral blood mononuclear cell; ... and 17 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF