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SequenceFile
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IGVFFI3192YNMR
IGVFFI3192YNMR
released
validated
Json view
File Set
IGVFDS2868BNHX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1039
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_1039_R1
md5sum
9c153cb50f82f752e867ef1c36f1e922
Content MD5sum
944196586eb2d41adbba154408c0e906
File Size
584 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-968_L3_SS-PKR-205_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1039
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
9961561
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8056DEAK
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4236FOND
yaml
seqspec
seqspec of IGVFFI3192YNMR, IGVFFI4030TRES, IGVFFI6689JANI
Jason Buenrostro, Broad
1.3 KB
validated